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Eight New Genomes and Synthetic Controls Increase the Accessibility of Rapid Melt-MAMA SNP Typing of Coxiella burnetii

Edvin Karlsson, Anna Macellaro, Mona Byström, Mats Forsman, Dimitrios Frangoulidis, Ingmar Janse, Pär Larsson, Petter Lindgren, Caroline Öhrman, Bart van Rotterdam, Andreas Sjödin and Kerstin Myrtennäs, PLoS One. 2014; 9(1): e85417.


Rapid Molecular Characterization of Acinetobacter baumannii Clones with rep-PCR and Evaluation of Carbapenemase Genes by New Multiplex PCR in Hospital District of Helsinki and Uusimaa

Tanja Pasanen, Suvi Koskela, Sointu Mero, Eveliina Tarkka, Päivi Tissari, Martti Vaara, and Juha Kirveskari PLoS One. 2014; 9(1): e85854.


Development of a Cost-Effective Method for Capripoxvirus Genotyping Using Snapback Primer and dsDNA Intercalating Dye

Esayas Gelaye, Charles Euloge Lamien, Roland Silber, Eeva S. M. Tuppurainen,Reingard Grabherr and Adama Diallo
PLoS One. 2013; 8(10): e75971.


Comparison between Chondrogenic Markers of Differentiated Chondrocytes from Adipose Derived Stem Cells and Articular Chondrocytes In Vitro

Mohmmad Mardani,Batool Hashemibeni, Malek Masoud Ansar, Sayeed Hamid Zarkesh Esfahani, Mohmmad Kazemi, Vahid Goharian, Nafiseh Esmaeili and Ebrahim Esfandiary,
Iran J Basic Med Sci. 2013 June; 16(6): 763–773.


Simultaneous Quantification of Multiple Bacteria by the BactoChip Microarray Designed to Target Species-Specific Marker Genes

Annalisa Ballarini,Nicola Segata,Curtis Huttenhower and Olivier Jousson
PLoS One. 2013; 8(2): e55764.


Transcriptome analysis of embryo maturation in maize

Keat Thomas Teoh, Deborah Vicuna Requesens, Shivakumar P Devaiah, Daniel Johnson, Xiuzhen Huang, John A Howard and Elizabeth E Hood
BMC Plant Biol. 2013; 13: 19.


The influence of cerebrospinal fluid on epidermal neural crest stem cells may pave the path for cell-based therapy

Sareh Pandamooz, Mohammad Naji, Farid Alinezhad, Amin Zarghami,and Mohsen Pourghasem
Stem Cell Res Ther. 2013; 4(4): 84.


Detection of the intercellular adhesion gene cluster (ica) in clinical Staphylococcus aureus isolates

Amirmorteza Ebrahimzadeh Namvar, Babak Asghari, Fatemeh Ezzatifar, Gholamreza Azizi, and Abdolaziz Rastegar Lari
GMS Hyg Infect Control. 2013; 8(1): Doc03.


Validation of eDNA Surveillance Sensitivity for Detection of Asian Carps in Controlled and Field Experiments

Andrew R. Mahon, Christopher L. Jerde, Matthew Galaska, Jennifer L. Bergner, W. Lindsay Chadderton, David M. Lodge, Margaret E. Hunter, and Leo G. Nico
PLoS One. 2013; 8(3): e58316


Expert Guide-Definitive qPCR Assay Design

Stephen Bustin,


Selection of reference genes for qPCR in hairy root cultures of peanut

Jose Condori, Cesar Nopo-Olazabal, Giuliana Medrano and Fabricio Medina-Bolivar
BMC Research Notes 2011, 4:392; Published: 10 October 2011


ORMA: a tool for identification of species-specific variations in 16S rRNA gene and oligonucleotides design

Marco Severgnini, Paola Cremonesi, Clarissa Consolandi, Giada Caredda, Gianluca De Bellis, Bianca Castiglioni. ORMA: a tool for identification of species-specific variations in 16S rRNA gene and oligonucleotides design. Nucleic acids research. 2009 Sep;37(16): e109


A roadmap for zinc trafficking in the developing barley grain based on laser capture microdissection and gene expression profiling.

Birgitte Tauris, Søren Borg, Per L Gregersen, Preben B Holm. A roadmap for zinc trafficking in the developing barley grain based on laser capture microdissection and gene expression profiling. Journal of experimental botany. 2009;60(4): 1333-47


Direct Sequence Detection of Structured H5 Influenza Viral RNA

Matthew B. Kerby, Sarah Freeman, Kristina Prachanronarong, Andrew W.
Artenstein, Steven M. Opal and Anubhav Tripathi
Journal of Molecular Diagnostics 2008, Vol. 10, No. 3


Occurrence and Genetic Diversity of Bacillus anthracis Strains Isolated in an Active Wool-Cleaning Factory

Pierre Wattiau, Silke R. Klee, David Fretin, Mieke Van Hessche, Marie Ménart,
Tatjana Franz, Camille Chasseur, Patrick Butaye, Hein Imberechts
Applied and Environmental Microbiology, July 2008, p. 4005-4011, Vol. 74, No. 13


Design of Microarray Probes for Detection of Mutations

Almeida, P. Carreto, L. Oliveira, J.L.
Parque Tecnol. de Cantanhede, Cantanhede;
Biocomputation, Bioinformatics and Biomedical Technologies, 2008. Page(s): 137-142
BIOTECHNO '08. International Conference on
Publication Date: June 29 2008-July 5 2008. Page(s): 137-142


Validation of reference genes for qPCR studies on Caco-2 cell differentiation

Claudia Pianaa, Michael Wirtha, Stefan Gerbesb, Helmut Viernsteina,
Franz Gabora and Stefan Toegela
European Journal of Pharmaceutics and Biopharmaceutics, 2008 - Elsevier


Genomic DNA sequence comparison between two inbred soybean cyst nematode biotypes facilitated by massively parallel 454 micro-bead sequencing

Sadia Bekal, J. P. Craig, M. E. Hudson, T. L. Niblack, L. L. Domier and K. N. Lambert
Journal Molecular Genetics and Genomics;Issue Volume 279, Number 5 / May, 2008 Pages 535-543


Detection and characterisation of human metapneumovirus from children with acute respiratory symptoms in north-west England, UK

M. Hopkins, C. Redmond, J. Shaw, I. Hart, C. Hart, R. Smyth, M. Semple ELSEVIER
Journal of Clinical Virology, July 2008, Volume 42, Issue 3, Pages 273-279


Comparison between chondroprotective effects of glucosamine, curcumin and diacerein in IL-1ß-stimulated C-28/I2 chondrocytes

S. Toegel, S. Wu, C. Piana, F. Unger, M. Wirth, M. Goldring, F. Gabor, H. Viernstein
Osteoarthritis and Cartilage, October 2008, Volume 16, Issue 10, Pages 1205-1212


AlleleID: A Pathogen Detection and Identification System

Arun Apte and Siddharth Singh
Methods Mol Biol. 2007;402:329-46
PMID: 17951804 [PubMed - indexed for MEDLINE]


Characterizing the Meiotic Failure and Transcriptional Aberrations Caused by Mutation of A-Myb in Mice

Barash, Alexander
2007 -


Salmonid host response to infectious hematopoietic necrosis (IHN) virus: Cellular receptors, viral control and novel pathways of defence

Kristina Miller, Garth Traxlera, Karia Kaukinena, Shaorong Lia, Jon Richarda and Norma Ginther
Aquaculture; Volume 272, Supplement 1, 2007, Pages S217-S237


Selection of reliable reference genes for qPCR studies on chondroprotective action

Toegel S, Huang W, Piana C, Unger FM, Wirth M, Goldring MB, Gabor F, Viernstein H.
BMC Mol Biol. 2007; 8: 13.
PMCID: 1820791


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Animal Viruses Probe Dataset (AVPDS) for Microarray-Based Diagnosis and Identification of Viruses

Brijesh S. Yadav, Mayank Pokhriyal, Dinesh P. Vasishtha, Bhaskar Sharma
Current Microbiology
March 2014, Volume 68, Issue 3, pp 301-304


Microarray Chip Based Identification of a Mixed Infection of Bovine Herpesvirus 1 and Bovine Viral Diarrhea 2 From Indian Cattle

Barkha Ratta, Brijesh Singh Yadav, Mayank Pokhriyal, Meeta Saxena, Bhaskar Sharma
Current Microbiology, January 2014, Volume 68, Issue 1, pp 127-131


Membrane-Based Oligonucleotide Array Developed from Multiple Markers for the Detection of Many Phytophthora Species

Wen Chen, Zeinab Robleh Djama, Michael D. Coffey, Frank N. Martin, Guillaume J. Bilodeau,
Lorien Radmer, Geoff Denton, and C. André Lévesque
Phytopathology, Vol. 103, No. 1, 2013


Genetic Types, Gene Repertoire, and Evolution of Isolates of the Salmonella enterica Serovar 4,5,12:i:− Spanish Clone Assigned to Different Phage Types

Patricia Garcíab, Burkhard Malornyb, Elisabeth Hauserb,c, M. Carmen Mendozaa and M. Rosario Rodicioa


LSD 2.0: an update of the leaf senescence database

Zhonghai Li,Yi Zhao, Xiaochuan Liu, Jinying Peng, Hongwei Guo and Jingchu Luo
Nucl. Acids Res. (1 January 2014) 42 (D1): D1200-D1205.


Microarray Analysis of Microbiota of Gingival Lesions in Noma Patients

Antoine Huyghe, Patrice François, Andrea Mombelli, Manuela Tangomo, Myriam Girard, Denise Baratti-Mayer, Ignacio Bolivar, Didier Pittet, Jacques Schrenze
PLoS Negl Trop Dis, 10.1371/journal.pntd.0002453


Demonstration of a Melanoma-Specific CD44 Alternative Splicing Pattern That Remains Qualitatively Stable, but Shows Quantitative Changes during Tumour Progression

Raso-Barnett L, Banky B, Barbai T, Becsagh P, Timar J, et al.
PLoS ONE 8(1): e53883. doi:10.1371/journal.pone.0053883


Identification of Multipath Genes Differentially Expressed in Pathway-Targeted Microarrays in Zebrafish Infected and Surviving Spring Viremia Carp Virus (SVCV) Suggest Preventive Drug Candidates

Encinas P, Garcia-Valtanen P, Chinchilla B, Gomez-Casado E, Estepa A, et al.
PLoS ONE 8(9): e73553. doi:10.1371/journal.pone.0073553


Utilisation of Mucin Glycans by the Human Gut Symbiont Ruminococcus gnavus Is Strain-Dependent

Crost EH, Tailford LE, Le Gall G, Fons M, Henrissat B, et al.
PLoS ONE 8(10): e76341. doi:10.1371/journal.pone.0076341


A high density COX1 barcode oligonucleotide array for identification and detection of species of Penicillium subgenus Penicillium.

Molecular Ecology Resources, 21 Apr 2009, Volume 9, Issue s1, Pages 114-129


Efficient algorithms for the discovery of DNA oligonucleotide barcodes from sequence databases.

Molecular Ecology Resources, 21 Apr 2009, Volume 9, Issue s1, Pages 58-64


Oligonucleotide microarray with RD-PCR labeling technique for detection and typing of human papillomavirus.

Min W, Wen-Li M, Bao Z, Ling L, Zhao-Hui S, Wen-Ling Z.
Curr Microbiol. 2006 Mar;52(3):204-9. Epub 2006 Feb 14


Infectious pathogen detection arrays: viral detection in cell lines and postmortem brain tissue.

Concepcion Conejero-Goldberg, Ena Wang, Chuli Yi, Terry E. Goldberg, Lorraine Jones-
Brando, Francesco M. Marincola, Maree J. Webster, E. Fuller Torrey.


OligoDesign: optimal design of LNA (locked nucleic acid) oligonucleotide capture probes for gene expression profiling.

Niels Tolstrup,* Peter S. Nielsen, Jens G. Kolberg, Annett M. Frankel, Henrik Vissing, Sakari Kauppinen.


Bioinformatics tools and guideline for PCR primer design.

Marianna Szemesa, D. Schoenb.


Whole-Genome DNA Microarray Analysis of a Hyperthermophile and an Archaeon: Pyrococcus furiosus Grown on Carbohydrates or Peptides.

Gerrit J. Schut, Scott D. Brehm, Susmita Datta, Michael W. Adams


DNA Microarray - A technology that is reshaping molecular biology.

M. Weghorst, Carol L.K. Sabourin


PREMIER Biosoft International's Array Designer facilitates primer and probe design for custom arrays.

Sarah Goforth Review


Beacon Designer™

Author and Details
Natural Haemozoin Induces Expression and Release of Human Monocyte Tissue Inhibitor of Metalloproteinase-1

Manuela Polimeni, Elena Valente, Daniela Ulliers, Ghislain Opdenakker, Philippe E. Van den Steen, Giuliana Giribaldi and Mauro Prato.
PLoS One. 2013; 8(8): e71468.

Prognostic and therapeutic implications of mTORC1 and Rictor expression in human breast cancer

U. Wazir, R. F. Newbold, W. G. Jiang, A. K. Sharma, K. Mokbel
Published online on: Wednesday, March 13, 2013
Journal: Oncology Reports; pages: 1969-1974
DOI: 10.3892/or.2013.2346;jsessionid=80EEBB7406F37C652EA5B839ADFD0C55?text=fulltext

Expression of death receptor-3 in human breast cancer and its functional effects on breast cancer cells in vitro

Zhicheng Ge, Andrew J. Sanders, Lin Ye, Robert E. Mansel, Wen G. Jiang
Published online on: Wednesday, January 30, 2013
Journal: Oncology Reports; pages: 1356-1364
DOI: 10.3892/or.2013.2259

Guanine Nucleotide Binding Protein β 1: A Novel Transduction Protein with a Possible Role in Human Breast Cancer UMAR WAZIR, WEN G. JIANG, ANUP K. SHARMA and KEFAH MOKBEL
Cancer Genomics and Proteomics March-April 2013 vol. 10 no. 2 69-73
Behavioral and Molecular Analysis of Nicotine-Conditioned Place Preference in Zebrafish

Ximena Kedikian, Maria Paula Faillace, Ramon Bernabeu
Published: July 24, 2013DOI: 10.1371/journal.pone.0069453

Sequential Triplex Real-Time PCR Assay for Detecting 21 Pneumococcal Capsular Serotypes That Account for a High Global Disease Burden

Fabiana C. Pimentaa, Alexis Roundtreea, Ahmet Soysalb, Mustafa Bakirb, Mignon du Plessisc, Nicole Wolterc, Anne von Gottbergc, Lesley McGeea, Maria da Gloria Carvalhoa and Bernard Bealla
Published ahead of print 5 December 2012, doi: 10.1128/JCM.02927-12
J. Clin. Microbiol. February 2013 vol. 51 no. 2 647-652

Rapid and Simultaneous Detection of blaKPC and blaNDM by Use of Multiplex Real-Time PCR

Michael Milillo, Yoon I. Kwak, Erik Snesrud, Paige E. Waterman, Emil Lesho and Patrick McGann
Published ahead of print 16 January 2013, doi: 10.1128/JCM.03316-12
J. Clin. Microbiol. April 2013 vol. 51 no. 4 1247-1249

The CXCL12/CXCR4 autocrine loop increases the metastatic potential of non-small cell lung cancer in vitro

Xiaofeng Dai, Zhifu Mao, Songping Xie, Hao Zhang, Jie Huang
Journal: Oncology Letters; Volume 5 Issue 1, January 2013
DOI: 10.3892/ol.2012.960;jsessionid=6200919BD23DDD7AE7B62157674F2164?text=fulltext

Low metabolic activity of biofilm formed by Enterococcus faecalis isolated from healthy humans and wild mallards (Anas platyrhynchos)

Włodzimierz Meissner, Tomasz A. Jarzembowski, Hanna Rzyska, Claudia Botelho and Anna Pałubicka.
Published online: 14 February 2013
Annals of Microbiology
© The Author(s) 2013

Evidence for Tumour Suppressor Function of DOK7 in Human Breast Cancer

James Bracken, Tamara Ghanem, Abdul Kasem, Wen G. Jiang, Kefah Mokbel
DOI: 10.4236/jct.2014.51009
JCT> Vol.5 No.1, January 2014

Construction of conditional lentivirus-mediated shRNA vector targeting the human Mirk gene and identification of RNAi efficiency in rhabdomyosarcoma RD cells

Boming Zhao, Cao Yang, Shuhua Yang, Yong Gao, Jing Wang
Published online on: Friday, August 2, 2013
Pages: 1253-1259
DOI: 10.3892/ijo.2013.2048

New insights in extracellular matrix remodeling and collagen turnover related pathways in cultured human tenocytes after ciprofloxacin administration

Alessandra Menon, Letizia Pettinari, Carla Martinelli, Graziano Colombo, Nicola Portinaro, Isabella Dalle-Donne, Maria Cristina d’Agostino, and Nicoletta Gagliano
Muscles Ligaments Tendons J. 2013 Jul-Sep; 3(3): 122–131.
Published online 2013 August 11.

Relationship between Vitamin D Receptor Gene Polymorphisms and Migraine without Aura in an Iranian Population

Mohammad Motaghi, Shaghayegh Haghjooy Javanmard, Faraidoon Haghdoost, Mohamadhasan Tajadini, Mohammad Saadatnia, Laleh Rafiee, and Alireza Zandifar
BioMed Research International
Volume 2013 (2013), Article ID 351942, 6 pages

Screening and identification of significant genes related to tumor metastasis and PSMA in prostate cancer using microarray analysis

Lin Xu, Zhu Wang, Xiao-Fei Li, Xia He, Lin-Lin Guan, Jiu-Ling Tuo, Yang Wang, Yanfen Luo, Hui-Ling Zhong, Shao-Peng Qiu, Kai-Yuan Cao
Published online on: Monday, August 5, 2013
Journal: Oncology Reports, October 2013; Volume 30 Issue 4
DOI: 10.3892/or.2013.2656

Potential implication of IL-24 in lymphangiogenesis of human breast cancer

Natasha C. Frewer, Lin Ye, Ping-Hui Sun, Sioned Owen, Ke Ji, Kathryn A. Frewer, Rachel Hargest, Wen G. Jiang
Published online on: Wednesday, March 27, 2013
DOI: 10.3892/ijmm.2013.1319
International Journal of Molecular Medicine
May 2013; Volume 31 Issue 5


Expert Guide-Definitive qPCR Assay Design

Stephen Bustin,


Acriflavine inhibits HIF-1 dimerization, tumor growth and vascularization

KangAe Lee, Huafeng Zhang, David Z. Qian, Sergio Rey, Jun O. Liu, Gregg L. Semenza
PNAS, October 20, 2009 vol. 106 no. 42 17910-17915


Angiomotin and angiomotin like proteins, their expression and correlation with angiogenesis and clinical outcome in human breast cancer.

Jiang WG, Watkins G, Douglas-Jones A, Holmgren L, Mansel RE.
BMC Cancer. 2006; 6: 16. published online before print January 23, 2006
PMCID: 1386688


Altered renal tubular expression of the complement inhibitor Crry permits complement activation after ischemia/reperfusion.

Thurman JM, Ljubanović D, Royer PA, Kraus DM, Molina H, Barry NP, Proctor G, Levi M, Holers VM.
J Clin Invest. 2006 Feb 1; 116(2): 357-368. published online before print January 26, 2006
PMCID: 1352158


Critical role of endothelial CXCR2 in LPS-induced neutrophil migration into the lung.

Reutershan J, Morris MA, Burcin TL, Smith DF, Chang D, Saprito MS, Ley K.
J Clin Invest. 2006 Mar 1; 116(3): 695-702. published online before print February 16, 2006 PMCID: 1366502


Chang HW, Yang CH, Chang PL, Cheng YH, Chuang LY.

BMC Genomics. 2006; 7: 30. published online before print February 17, 2006
PMCID: 1386656


Computing TaqMan® probes for Multiplex PCR Detection of E. coli O157 Serotypes in water

Siya Ram, Rishi Shanker


THP-1 Monocytes Up-Regulate Intercellular Adhesion Molecule 1 in Response to Pneumolysin from Streptococcus pneumoniae.

Thornton J, McDaniel LS. Infect Immun. 2005 Oct; 73(10): 6493-6498. PMCID: 1230928


Serotype-Specific Detection of Dengue Viruses in a Fourplex Real-Time Reverse Transcriptase PCR Assay.

Johnson BW, Russell BJ, Lanciotti RS. J Clin Microbiol. 2005 Oct; 43(10): 4977-4983. PMCID: 1248506


Up-Regulation and Profibrotic Role of Osteopontin in Human Idiopathic Pulmonary Fibrosis. Pardo A, Gibson K, Cisneros J, Richards TJ, Yang Y, Becerril C, Yousem S, Herrera I, Ruiz V, Selman M, Kaminski N.

PLoS Med. 2005 Sep; 2(9): e251. published online before print September 6, 2005 PMCID: 1198037


Role of HtrA in Growth and Competence of Streptococcus mutans UA159.

Ahn SJ, Lemos JA, Burne RA.
J Bacteriol. 2005 May; 187(9): 3028-3038.
PMCID: 1082816


Real-Time-PCR Assay for Diagnosis of Entamoeba histolytica Infection.

Roy S, Kabir M, Mondal D, Ali IK, Petri WA Jr, Haque R. J Clin Microbiol. 2005 May; 43(5): 2168-2172. PMCID: 1153781


The Yeast Ubiquitin Ligase SCFMet30 Regulates Heavy Metal Response.

Yen JL, Su NY, Kaiser P. Mol Biol Cell. 2005 Apr; 16(4): 1872-1882. PMCID: 1073668


Two α(1-3) Glucan Synthases with Different Functions in Aspergillus fumigatus.

Beauvais A, Maubon D, Park S, Morelle W, Tanguy M, Huerre M, Perlin DS, Latgé JP.
Appl Environ Microbiol. 2005 Mar; 71(3): 1531-1538.
PMCID: 1065186


Rapid, High-Throughput, Multiplex, Real-Time PCR for Identification of Mutations in the cyp51A Gene of Aspergillus fumigatus That Confer Resistance to Itraconazole.

Balashov SV, Gardiner R, Park S, Perlin DS.
J Clin Microbiol. 2005 Jan; 43(1): 214-222.
PMCID: 540178


Translation of a Small Subset of Caenorhabditis elegans mRNAs Is Dependent on a Specific Eukaryotic Translation Initiation Factor 4E Isoform.

Dinkova TD, Keiper BD, Korneeva NL, Aamodt EJ, Rhoads RE.
Mol Cell Biol. 2005 Jan; 25(1): 100-113.
PMCID: 538781


Proteoglycans and catabolic products of proteoglycans present in ligament.

Ilic M, Carter P, Tyndall A, Dudhia J, Handley C.
Biochem J. 2005 Jan 15; 385(Pt 2): 381-388. published online before print January 7, 2005
PMCID: 1134708


A molecular beacon, bead-based assay for the detection of nucleic acids by flow cytometry.

Horejsh D, Martini F, Poccia F, Ippolito G, Di Caro A, Capobianchi MR.
Nucleic Acids Res. 2005; 33(2): e13. published online before print January 19, 2005
PMCID: 548373


Regulation of hepcidin transcription by interleukin-1 and interleukin-6.

Lee P, Peng H, Gelbart T, Wang L, Beutler E.
Proc Natl Acad Sci U S A. 2005 Feb 8; 102(6): 1906-1910. published online before print January 31, 2005
PMCID: 548537


Mechanisms of Azole Resistance in Clinical Isolates of Candida glabrata Collected during a Hospital Survey of Antifungal Resistance.

Sanguinetti M, Posteraro B, Fiori B, Ranno S, Torelli R, Fadda G.
Antimicrob Agents Chemother. 2005 Feb; 49(2): 668-679.
PMCID: 547307


Two distinctive pathways for recruitment of naïve and primed IgM+ B cells to the gut lamina propria.

Suzuki K, Meek B, Doi Y, Honjo T, Fagarasan S.
Proc Natl Acad Sci U S A. 2005 Feb 15; 102(7): 2482-2486. published online before print February 3, 2005
PMCID: 548994


Identification and Gene Expression Analysis of a Large Family of Transmembrane Kinases Related to the Gal/GalNAc Lectin in Entamoeba histolytica.

Beck DL, Boettner DR, Dragulev B, Ready K, Nozaki T, Petri WA Jr.
Eukaryot Cell. 2005 Apr; 4(4): 722-732.
PMCID: 1087818


Stromal cell derived factor-1: its influence on invasiveness and migration of breast cancer cells in vitro and its association with prognosis and survival in human breast cancer.

Kang H, Watkins G, Parr C, Douglas-Jones A, Mansel RE, Jiang WG.
Breast Cancer Res. 2005; 7(4): R402-R410. published online before print April 4, 2005
PMCID: 1175055


The F-Box Protein Met30 Is Required for Multiple Steps in the Budding Yeast Cell Cycle.

Su NY, Flick K, Kaiser P.
Mol Cell Biol. 2005 May; 25(10): 3875-3885.
PMCID: 1087702


Cultivation of Mesophilic Soil Crenarchaeotes in Enrichment Cultures from Plant Roots.

Simon HM, Jahn CE, Bergerud LT, Sliwinski MK, Weimer PJ, Willis DK, Goodman RM.
Appl Environ Microbiol. 2005 Aug; 71(8): 4751-4760.
PMCID: 1183331


Gene expression evidence for remodeling of lateral hypothalamic circuitry in cocaine addiction. Ahmed SH, Lutjens R, van der Stap LD, Lekic D, Romano-Spica V, Morales M, Koob GF, Repunte-Canonigo V, Sanna PP.

Proc Natl Acad Sci U S A. 2005 Aug 9; 102(32): 11533-11538. published online before print August 2, 2005
PMCID: 1183574


Type 2 iodothyronine deiodinase is the major source of plasma T3 in euthyroid humans. Maia AL, Kim BW, Huang SA, Harney JW, Larsen PR.

J Clin Invest. 2005 Sep 1; 115(9): 2524-2533. published online before print August 25, 2005
PMCID: 1190373


Use of Molecular Beacons for Rapid, Real-Time, Quantitative Monitoring of Cytotoxic T-Lymphocyte Epitope Mutations in Simian Immunodeficiency Virus.

Peyerl FW, Barouch DH, Bazick HS, Manuel E, Letvin NL.
J Clin Microbiol. 2005 Sep; 43(9): 4773-4779.
PMCID: 1234110


Use of a Multiplex Molecular Beacon Platform for Rapid Detection of Methicillin and Vancomycin Resistance in Staphylococcus aureus.

Sinsimer D, Leekha S, Park S, Marras SA, Koreen L, Willey B, Naidich S, Musser KA, Kreiswirth BN.
J Clin Microbiol. 2005 Sep; 43(9): 4585-4591.
PMCID: 1234154


CpG-island fragments from the HNRPA2B1/CBX3 genomic locus reduce silencing and enhance transgene expression from the hCMV promoter/enhancer in mammalian cells.

Williams S, Mustoe T, Mulcahy T, Griffiths M, Simpson D, Antoniou M, Irvine A, Mountain A, Crombie R.
BMC Biotechnol. 2005; 5: 17. published online before print June 3, 2005
PMCID: 1175082


Pulmonary Interleukin-23 Gene Delivery Increases Local T-Cell Immunity and Controls Growth of Mycobacterium tuberculosis in the Lungs.

Happel KI, Lockhart EA, Mason CM, Porretta E, Keoshkerian E, Odden AR, Nelson S, Ramsay AJ.
Infect Immun. 2005 Sep; 73(9): 5782-5788.
PMCID: 1231058


Helicobacter hepaticus Hydrogenase Mutants Are Deficient in Hydrogen-Supported Amino Acid Uptake and in Causing Liver Lesions in A/J Mice.

Mehta NS, Benoit S, Mysore JV, Sousa RS, Maier RJ.
Infect Immun. 2005 Sep; 73(9): 5311-5318.
PMCID: 1231121


Gene expression profiling in conjunction with physiological rescues of IKKα null cells with Wt. or mutant IKKα reveals distinct classes of IKKα/NF-κB dependent genes.

J Biol Chem. Author manuscript; available in PMC 2005 September 23.
PMCID: 1226413


Computing TaqMan® probes for Multiplex PCR Detection of E. coli O157 Serotypes in water.

Siya Ram, Rishi Shanker.
9th October 2005.


Expression of thromboxane synthase, TBXAS1 and the thromboxane A2 receptor, TBXA2R, in human breast cancer.

Watkins G, Douglas-Jones A, Mansel RE, Jiang WG.
Int Semin Surg Oncol. 2005; 2: 23. published online before print October 26, 2005
PMCID: 1289289


Development of a cob-18S rRNA Gene Real-Time PCR Assay for Quantifying Pfiesteria shumwayae in the Natural Environment.

Zhang H, Lin S.
Appl Environ Microbiol. 2005 Nov; 71(11): 7053-7063.
PMCID: 1287735


Chromatin Immunoprecipitation-Based Screen To Identify Functional Genomic Binding Sites for Sequence-Specific Transactivators.

Hearnes JM, Mays DJ, Schavolt KL, Tang L, Jiang X, Pietenpol JA.
Mol Cell Biol. 2005 Nov; 25(22): 10148-10158.
PMCID: 1280257


Role of Histone Deacetylation in Cell-specific Expression of Endothelial Nitric-oxide Synthase.

Gan Y, Shen YH, Wang J, Wang X, Utama B, Wang J, Wang XL.
J Biol Chem. Author manuscript; available in PMC 2005 November 14.
PMCID: 1283144


Expression of the nifH Gene of a Herbaspirillum Endophyte in Wild Rice Species: Daily Rhythm during the Light-Dark Cycle.

You M, Nishiguchi T, Saito A, Isawa T, Mitsui H, Minamisawa K.
Appl Environ Microbiol. 2005 Dec; 71(12): 8183-8190.
PMCID: 1317309


Inhibition of steroidogenic response to ACTH by leptin: implications for the adrenal response to maternal separation in neonatal rats.

Camila Salzmann, Melissa Otis, Hong Long, Claude Roberge, Nicole Gallo-Payet, Claire-Dominique Walker.
11th December 2005.


Real-Time Multiplex PCR Assay for Detection of Brucella spp., B. abortus and B.melitensis.

Probert WS, Schrader KN, Khuong NY, Bystrom SL, Graves MH.
J Clin Microbiol. 2004 Mar; 42(3): 1290-1293.
PMCID: 356861


Paradigms for computational nucleic acid design.

Dirks RM, Lin M, Winfree E, Pierce NA.
Nucleic Acids Res. 2004; 32(4): 1392-1403. published online before print February 27, 2004 PMCID: 390280


Aberrant expansion of segmented filamentous bacteria in IgA-deficient gut.

Suzuki K, Meek B, Doi Y, Muramatsu M, Chiba T, Honjo T, Fagarasan S.
Proc Natl Acad Sci U S A. 2004 Feb 17; 101(7): 1981-1986. published online before print February 6, 2004
PMCID: 357038


Rapid and Sensitive Method Using Multiplex Real-Time PCR for Diagnosis of Infections by Influenza A and Influenza B Viruses, Respiratory Syncytial Virus and Parainfluenza Viruses 1, 2, 3 and 4.

Templeton KE, Scheltinga SA, Beersma MF, Kroes AC, Claas EC.
J Clin Microbiol. 2004 Apr; 42(4): 1564-1569.
PMCID: 387552


The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development.

Vaucheret H, Vazquez F, Crété P, Bartel DP.
Genes Dev. 2004 May 15; 18(10): 1187-1197.
PMCID: 415643


The IL-6- and lipopolysaccharide-induced transcription of hepcidin in HFE-, transferrin receptor 2- and β2-microglobulin-deficient hepatocytes.

Lee P, Peng H, Gelbart T, Beutler E.
Proc Natl Acad Sci U S A. 2004 Jun 22; 101(25): 9263-9265. published online before print
June 10, 2004
PMCID: 438964


Activated leukocyte cell adhesion molecule in breast cancer: prognostic indicator.

King JA, Ofori-Acquah SF, Stevens T, Al-Mehdi AB, Fodstad O, Jiang WG.
Breast Cancer Res. 2004; 6(5): R478-R487. published online before print June 28, 2004
PMCID: 549164


Detection and Quantification of Gene Expression in Environmental Bacteriology.

Sharkey FH, Banat IM, Marchant R.
Appl Environ Microbiol. 2004 Jul; 70(7): 3795-3806.
PMCID: 444812


Activation of cytokines and NF-kappa B in corneal epithelial cells infected by respiratory syncytial virus: potential relevance in ocular inflammation and respiratory infection.

Bitko V, Garmon NE, Cao T, Estrada B, Oakes JE, Lausch RN, Barik S.
BMC Microbiol. 2004; 4: 28. published online before print July 15, 2004
PMCID: 481065


Down-Regulation of Rad51 and Decreased Homologous Recombination in Hypoxic Cancer Cells.

Bindra RS, Schaffer PJ, Meng A, Woo J, Måseide K, Roth ME, Lizardi P, Hedley DW, Bristow RG, Glazer PM.
Mol Cell Biol. 2004 Oct; 24(19): 8504-8518.
PMCID: 516750


Role and Regulation of σs in General Resistance Conferred by Low-Shear Simulated Microgravity in Escherichia coli.

Lynch SV, Brodie EL, Matin A.
J Bacteriol. 2004 Dec; 186(24): 8207-8212.
PMCID: 532419


Identification and Discrimination of Burkholderia pseudomallei, B. mallei and B. thailandensis by Real-Time PCR Targeting Type III Secretion System Genes.

Thibault FM, Valade E, Vidal DR.
J Clin Microbiol. 2004 Dec; 42(12): 5871-5874.
PMCID: 535269


Expression of transglutaminases in human breast cancer and their possible clinical significance

Wen. G. Jiang, Richard Ablin, Anthony Douglas-Jones, Robert E. Mansel


Prognostic Value of Rho GTPases and Rho Guanine Nucleotide Dissociation Inhibitors in Human Breast Cancers

Wen G. Jiang1, Gareth Watkins, Jane Lane, Giles H. Cunnick Anthony Douglas-
Jones, Kefah Mokbel, Robert E. Mansel


Levels of expression of endothelial markers specific to tumour-associated endothelial cells and their correlation with prognosis in patients with breast cancer

Gaynor Davies1, Giles H Cunnick1, Robert E Mansel1, Malcolm D Mason2&Wen
G Jiang1


Expression of human delta-6- desaturase is associated with aggressiveness of human breast cancer

Jane Wane, Robert E. Mansel, Wen G. Jiang


Activated leukocyte cell adhesion molecule in breast cancer: prognostic indicator

Judy A King1, Solomon F Ofori-Acquah, Troy Stevens, Abu-Bakr Al-Mehdi
Oystein Fodstad and Wen G Jiang


Levels of expression of lipoxygenases and cyclooxygenase-2 in human breast cancer

Wen G. Jianga, Anthony Douglas-Jonesb, Robert E. Mansela


Comparison of Real-Time PCR, Conventional PCR and Galactomannan Antigen Detection by Enzyme-Linked Immunosorbent Assay Using Bronchoalveolar Lavage Fluid Samples from Hematology Patients for Diagnosis of Invasive Pulmonary Aspergillosis Maurizio Sanguinetti,

Brunella Posteraro, Livio Pagano, Gabriella Pagliari, Luana Fianchi, Luca Mele,
Marilena La Sorda, Angelica Franco, Giovanni Fadda


Deubiquitination of type 2 iodothyronine deiodinase by von Hippel Lindau protein interacting deubiquitinating enzymes regulates thyroid hormone activation

Cyntia Curcio-Morelli, Ann Marie Zavacki, Marcelo Christofollete, Balazs Gereben, Beatriz C.G., John W. Harney, Zaibo, Guan Wu, Antonio C.


Inhibition of steroidogenic response to ACTH by leptin: implications for the adrenal response to maternal separation in neonatal rats.

Camila Salzmann, Melissa Otis, Hong Long, Claude Roberge, Nicole Gallo-
Payet, Claire-Dominique Walker.


Expression of human delta-6- desaturase is associated with aggressiveness of human breast cancer

Jane Lane, Robert E. Mansel, Wen G. Jiang


Design of molecular beacons for AmpliDet RNA assay. Characterization of binding stability and probe specificity

Marianna Szemesa, D. Schoenb.,AB03(315)189.PDF


Differential PDGF secretion by graft and aortic SMC in response to oxidized LDL

Afaf Absood, Akira Furutani, Tsutomu Kawamura, Linda M. Graham


Prognostic Value of Rho GTPases and Rho Guanine Nucleotide Dissociation Inhibitors in Human Breast Cancers.

Wen G. Jiang1, Gareth Watkins, Jane Lane, Giles H. Cunnick Anthony Douglas-Jones, Kefah Mokbel, Robert E. Mansel.
15th December 2003


Expression of transglutaminases in human breast cancer and their possible clinical significance.

Wen. G. Jiang, Richard Ablin, Anthony Douglas-Jones, Robert E. Mansel.
Nov-Dec 2003.


History of the Baylor Charles A. Sammons Cancer Center.

Stone MJ, Aronoff BE, Evans WP, Fay JW, Lieberman ZH, Matthews CM, Race GJ, Scruggs RP, Stringer CA JR.
Proc (Bayl Univ Med Cent). 2003 Jan; 16(1): 30-58.
PMCID: 1200808


Deubiquitination of type 2 iodothyronine deiodinase by von Hippel–Lindau protein–interacting deubiquitinating enzymes regulates thyroid hormone activation.

Curcio-Morelli C, Zavacki AM, Christofollete M, Gereben B, de Freitas BC, Harney JW, Li Z, Wu G, Bianco AC.
J Clin Invest. 2003 Jul 15; 112(2): 189-196.
PMCID: 164294


Comparison of Real-Time PCR, Conventional PCR and Galactomannan Antigen Detection by Enzyme-Linked Immunosorbent Assay.
Using Bronchoalveolar Lavage Fluid Samples from Hematology Patients for Diagnosis of Invasive Pulmonary Aspergillosis.

Sanguinetti M, Posteraro B, Pagano L, Pagliari G, Fianchi L, Mele L, La Sorda M, Franco A, Fadda G.
J Clin Microbiol. 2003 Aug; 41(8): 3922-3925.
PMCID: 179803


The Derbyshire General Infirmary and the Derby philosophers: the application of industrial architecture and technology to medical institutions in early-nineteenth-century England.

Elliott P.
Med Hist. 2002 Jan; 46(1): 65-92.
PMCID: 1044459


Some promising dimensions for behavioral community technology.

Fawcett SB, Mathews RM, Fletcher RK.
J Appl Behav Anal. 1980; 13(3): 505-518.
PMCID: 1308154


Primer Primer

Author and Details
Suppression of type I collagen in human scleral fibroblasts treated with extremely low-frequency electromagnetic fields.

Jie Wang, Jiefeng Cui and Huang Zhu

Mol Vis. 2013; 19: 885–893.
Published online 2013 April 12.

Trop2 regulates the proliferation and differentiation of murine compact-bone derived MSCs Jianye Yang, Zhaohui Zhu, Hongfei Wang, Feifei Li, Xinling Du, Runlin Z. Ma
International Journal of Oncology
September 2013; Volume 43 Issue 3.;jsessionid=6AC88FD35EE63ABEC9BE9945D11EAE36?text=fulltext
A Pipeline with Multiplex Reverse Transcription Polymerase Chain Reaction and Microarray for Screening of Chromosomal Translocations in Leukemia Fei-Fei Xiong, Ben-Shang Li, Chun-Xiu Zhang, Hui Xiong, Shu-Hong Shen, and Qing-Hua Zhang

BioMed Research International
Volume 2013 (2013), Article ID 135086, 13 pages

The polymorphisms of chemokine gene in channel catfish (Ictalurus punctatus) and the associations with susceptibility/resistance to Edwardsiella ictaluri

Lei Gao, Xiaoxi Du, Hao Su, Xianggang Gao, Yunfeng Li, Xiangbo Bao, Weidong Liu and Chongbo He

ISSN 2050-0874
Volume 2

Cloning and expression analysis of the 37-kDa laminin receptor precursor gene from Hyriopsis cumingii

X.Z. Chang, J.L. Li, Z.Y. Bai and X.L. Li

Genet. Mol. Res. 12 (4): 6130-6139 (2013)
Received July 18, 2013
Accepted October 10, 2013
Published December 2, 2013

In vitro RNA interference targeting the DNA polymerase gene inhibits orf virus replication in primary ovine fetal turbinate cells

Gaili Wang, Wenqi He, Deguang Song, Jida Li, Yingfu Bao, Rongguang Lu, Jingying Bi, Kui Zhao, Feng Gao

Archives of Virology
Official Journal of the Virology Division of the International Union of Microbiological Societies

Acroframosome-Dependent KIFC1 Facilitates Acrosome Formation during Spermatogenesis in the Caridean Shrimp Exopalaemon modestus

Cong-Cong Hou, Wan-Xi Yang

Published: September 30, 2013;
DOI: 10.1371/journal.pone.007606

Fine mapping of GS2, a dominant gene for big grain rice

Wuhan Zhang, Pingyong Sun, Qiang He, Fu Shu, Jie Wang, Huafeng Deng

The Crop Journal
Volume 1, Issue 2, December 2013, Pages 160–165

Molecular Identification of Ancylostoma caninum Isolated from Cats in Southern China Based on Complete ITS Sequence

Yuanjia Liu, Guochao Zheng, Muhamd Alsarakibi, Xinheng Zhang, Wei Hu, Pengyun Lu, Liqin Lin, Liping Tan, Qin Luo, and Guoqing Li

BioMed Research International
Volume 2013 (2013), Article ID 868050, 6 pages

Molecular cloning and characterization of SoNCED, a novel gene encoding 9-cis-epoxycarotenoid dioxygenase from sugarcane (Saccharum officinarum L.)

Chang-Ning Li, Manoj-Kumar Srivastava, Qian Nong, Li-Tao Yang, Yang-Rui Li

Genes & Genomics
February 2013, Volume 35, Issue 1, pp 101-109

Longitudinal Analyses of Gut Mucosal Microbiotas in Ulcerative Colitis in Relation to Patient Age and Disease Severity and Duration

Alemu Fite, Sandra Macfarlane, Elizabeth Furrie, Bahram Bahrami, John H. Cummings, Douglas T. Steinke and George T. Macfarlane

J. Clin. Microbiol. March 2013 vol. 51 no. 3 849-856

Isolation and Characterization of Microsatellite Loci for a Bioenergy Grass, Miscanthus sacchariflorus (Poaceae)

Hai-Fei Zhou 2,3, Shan-Shan Li 2, and Song Ge 2

Applications in Plant Sciences 1(1):1200210. 2013

Development of Microsatellite Markers for Lagerstroemia indica (Lythraceae) and Related Species

Yang Liu, Dan He, Ming Cai, Wan Tang, Xiao-Yuan Li, Hui-Tang Pan, and Qi-Xiang Zhang.

Applications in Plant Sciences 1(2):1200203. 2013

Selection of Reliable Reference Genes for Gene Expression Studies in the Biofuel Plant Jatropha curcas Using Real-Time Quantitative PCR

Lu Zhang, Liang-Liang He , Qian-Tang Fu and Zeng-Fu Xu.

Int. J. Mol. Sci. 2013, 14(12), 24338-24354

Molecular characterization of a cellulose synthase gene (AaxmCesA1) isolated from an Acacia auriculiformis x Acacia mangium hybrid

Seok Yien Christina Yong, Ratnam Wickneswari

Plant Molecular Biology Reporter
© The Author(s) 2012

Distinct Transcriptional Profiles and Phenotypes Exhibited by Escherichia coli O157:H7 Isolates Related to the 2006 Spinach-Associated Outbreak

Craig T. Parker, Jennifer L. Kyle, Steven Huynh, Michelle Q. Carter, Maria T. Brandl and Robert E. Mandrell

Appl. Environ. Microbiol. January 2012 vol. 78 no. 2 455-463

Vitamin D receptor gene BsmI polymorphism B allele, but not BB genotype, is associated with systemic lupus erythematosus in a Han Chinese population

X-Y Luo, M-H Yang, F-X Wu, L-J Wu, L Chen, Z Tang, N-T Liu, X-F Zeng, J-L Guan & G-H Yuan

Lupus January 2012 vol. 21 no. 1 53-59

The Beginning of the rpoB Gene in Addition to the Rifampin Resistance Determination Region Might Be Needed for Identifying Rifampin/Rifabutin Cross-Resistance in Multidrug-Resistant Mycobacterium tuberculosis Isolates from Southern China

Yaoju Tan, Zuqiong Hu, Yanlin Zhao, Xingshan Cai, Chunming Luo, Cairong Zou and Xin Liu.

J. Clin. Microbiol. January 2012 vol. 50 no. 1 81-85

Characterization of the complete mitochondrial genomes of five Eimeria species from domestic chickens

Rui-Qing Lin, Li-Ling Qiu, Guo-Hua Liu, Xiang-Yun Wu, Ya-Biao Weng, Wen-Qin Xie, Jie Hou, Hong Pan, Zi-Guo Yuan, Feng-Cai Zou, Min Hu, Xing-Quan Zhu.

Volume 480, Issues 1–2, 1 July 2011, Pages 28–33

Hsa-let-7g inhibits proliferation of hepatocellular carcinoma cells by downregulation of c-Myc and upregulation of p16INK4A

Fei-Fei Lan, Hua Wang, Yang-Chao Chen, Chu-Yan Chan, Samuel S. Ng, Kui Li, Dan Xie, Ming-Liang He, Marie C. Lin, Hsiang-Fu Kung.

International Journal of Cancer
Volume 128, Issue 2, pages 319–331, 15 January 2011

Molecular Characterization of Circulating Tumor Cells in Breast Cancer by a Liquid Bead Array Hybridization Assay

Athina Markou, Areti Strati, Nikos Malamos, Vasilis Georgoulias and Evi S. Lianidou.

Clinical Chemistry
March 2011 vol. 57 no. 3 421-430

miR-122 inhibits viral replication and cell proliferation in hepatitis B virus-related hepatocellular carcinoma and targets NDRG3

Chun-Guang Fan, Chun-Mei Wang, Chuan Tian, Yan Wang, Li Li, Wen-Sheng Sun, Rui-Feng Li, Yu-Gang Liu

Ocology Reports,
Published online on: Friday, July 1, 2011
Pages: 1281-1286

CYP4F2 rs2108622: a minor significant genetic factor of warfarin dose in Han Chinese patients with mechanical heart valve replacement

Han-Jing Cen, Wu-Tao Zeng, Xiu-Yu Leng, Min Huang, Xiao Chen, Jia-Li Li, Zhi-Ying Huang, Hui-Chang Bi, Xue-Ding Wang, Yan-Ling He, Fan He, Rui-Na Zhou, Qi-Shan Zheng, Li-Zi Zhao.

British Journal of Clinical Pharmacology
Volume 70, Issue 2, pages 234–240, August 2010

Species Identification of Medicinal Pteridophytes by a DNA Barcode Marker, the Chloroplast psbA-trnH Intergenic Region

Xin-Ye Ma, Cai-Xiang Xie, Chang Liu, Jing-Yuan Song, Hui Yao, Kun Luo, Ying-Jie Zhu, Ting Gao, Xiao-Hui Pang, Jun Qian, Shi-Lin Chen.

Biol. Pharm. Bull. 33(11) 1919—1924 (2010)

Mixotrophic and photoheterotrophic metabolism in Cyanothece sp. ATCC 51142 under continuous light

Xueyang Feng, Anindita Bandyopadhyay, Bert Berla, Lawrence Page, Bing Wu, Himadri B. Pakrasi and Yinjie J. Tang.

Microbiology August 2010 vol. 156 no. 8 2566-2574

Excessive ovarian stimulation up-regulates the Wnt-signaling molecule DKK1 in human endometrium and may affect implantation: an in vitro co-culture study

Yunao Liu, Suranga P. Kodithuwakku, Pak-Yiu Ng, Joyce Chai, Ernest H.Y. Ng, William S.B. Yeung, Pak-Chung Ho and Kai-Fai Lee.

Hum. Reprod. (2010) 25 (2): 479-490.

Detection of intergenic non-coding RNAs expressed in the main developmental stages in Drosophila melanogaster

Zheng Li, Min Liu, Li Zhang, Wenxia Zhang, Ge Gao, Zuoyan Zhu, Liping Wei, Qichang Fan and Manyuan Long.

Nucl. Acids Res. (2009) 37 (13): 4308-4314.
doi: 10.1093/nar/gkp334

The Role of Recombinant Human Elafin in the Resistance of A549 Cells against Pseudomonas aeruginosa Biofilm

Li Q., Zhou X., Nie X. and Yang J.

Respiration 2010;79:68–75

Complete sequence of a duck astrovirus associated with fatal hepatitis in ducklings

Yu Fu, Meng Pan, Xiaoyan Wang, Yongliang Xu, Xiaoyu Xie, Nick J. Knowles, Hanchun Yang and Dabing Zhang.

J Gen Virol May 2009 vol. 90 no. 5 1104-1108.

The Succinate Dehydrogenase Genetic Testing in a Large Prospective Series of Patients with Paragangliomas

Nelly Burnichon, Vincent Rohmer, Laurence Amar, Philippe Herman, Sophie Leboulleux, Vincent Darrouzet, Patricia Niccoli, Dominique Gaillard, Gérard Chabrier, Frédéric Chabolle, Isabelle Coupier, Philippe Thieblot, Pierre Lecomte, Jérôme Bertherat, Nelly Wion-Barbot, Arnaud Murat, Annabelle Venisse, Pierre-François Plouin, Xavier Jeunemaitre, Anne-Paule Gimenez-Roqueplo

JCEM; Volume 94 Issue 8 | August 1, 2009.

Large CACNA1A Deletion in a Family With Episodic Ataxia Type 2

Florence Riant, MD; Reda Mourtada, MD; Pascale Saugier-Veber, MD; Elisabeth Tournier-Lasserve, MD

Arch Neurol. 2008;65(6):817-820.

A multilocus phylogeny of the Streptomyces griseus 16S rRNA gene clade: use of multilocus sequence analysis for streptomycete systematics

Yinping Guo, Wen Zheng, Xiaoying Rong and Ying Huang.

IJSEM January 2008 vol. 58 no. 1 149-159

Development of SSR markers from ESTs of gramineous species and their chromosome location on wheat

Linzhi Li1, Junjun Wang, Ying Guo, Fangshan Jiang, Yunfeng Xu, Yingying Wang, Haitao Pan, Guanzhu Han, Ruijun Li, Sishen Li.

Progress in Natural Science
Volume 18, Issue 12, 10 December 2008, Pages 1485–1490

Relationship of Paraoxonase 1 (PON1) Gene Polymorphisms and Functional Activity With Systemic Oxidative Stress and Cardiovascular Risk

Tamali Bhattacharyya, MD, MS; Stephen J. Nicholls, MBBS, PhD; Eric J. Topol, MD; Renliang Zhang, MD, PhD; Xia Yang, PhD; David Schmitt, BA; Xiaoming Fu, MS; Mingyuan Shao, MS; Danielle M. Brennan, MS; Stephen G. Ellis, MD; Marie-Luise Brennan, PhD; Hooman Allayee, PhD; Aldons J. Lusis, PhD; Stanley L. Hazen, MD, PhD

JAMA. 2008;299(11):1265-1276. doi:10.1001/jama.299.11.1265.

Response of Leptospira interrogans to Physiologic Osmolarity: Relevance in Signaling the Environment-to-Host Transition

James Matsunaga, Miranda Lo, Dieter M. Bulach, Richard L. Zuerner, Ben Adler, and David A. Haake.

Infect. Immun. June 2007 vol. 75 no. 6 2864-2874

Axon Guidance Cue Netrin-1 Has Dual Function in Angiogenesis

Yun Yang, Li Zou, Yong Wan, Ke-Shu Xu, Jin-Xiang Zhang, Jing-Hui Zhang

Cancer Biology & Therapy 6:5, 743-748, May 2007

Discovery of a Novel Human Picornavirus in a Stool Sample from a Pediatric Patient Presenting with Fever of Unknown Origin

Morris S. Jones, Vladimir V. Lukashov, Robert D. Ganac and David P. Schnurr.

J. Clin. Microbiol. July 2007 vol. 45 no. 7 2144-2150

New Adenovirus Species Found in a Patient Presenting with Gastroenteritis

Morris Saffold Jones II, Balázs Harrach, Robert D. Ganac, Mary M. A. Gozum, Wilfred P. dela Cruz, Brian Riedel, Chao Pan, Eric L. Delwart, and David P. Schnurr.

J. Virol. June 2007 vol. 81 no. 11 5978-5984

Expression of cyclooxygenase-2 in orbital fibroadipose connective tissues of Graves’ ophthalmopathy patients

E Berrin Yuksel Konuk, Onur Konuk, Muge Misirlioglu, Adnan Menevse and Mehmet Unal.

Eur J Endocrinol November 1, 2006 155 681-685

Differential gene expression in egg cells and zygotes suggests that the transcriptome is restructed before the first zygotic division in tobacco

Jue Ning, Xiong-Bo Peng, Liang-Huan Qu, Hai-Ping Xin, Ting-Ting Yan, Mengxiang Sun

FEBS Letters; Volume 580, Issue 7, 20 March 2006, Pages 1747–1752

Comparison of allele specific oligonucleotide-polymerase chain reaction and direct sequencing for high throughput screening of ABL kinase domain mutations in chronic myeloid leukemia resistant to imatinib

HY Kang, JY Hwang, SH Kim, HG Goh, M Kim and DW Kim

haematol 2006 May vol. 91 no. 5 659-662

Phenotype-Genotype Correlation in Eight Chinese 17α-Hydroxylase/17,20 Lyase-Deficiency Patients with Five Novel Mutations of CYP17A1 Gene

Jun Yang, Bin Cui, Shouyue Sun, Tieliu Shi, Siyuan Zheng, Yufang Bi, Jianmin Liu, Yongju Zhao, Jialun Chen, Guang Ning and Xiaoying Li

JCEM; Volume 91 Issue 9 | September 1, 2006.

Expression and secretion of inflammation-related adipokines by human adipocytes differentiated in culture: integrated response to TNF-α

Bohan Wang , John R. Jenkins , Paul Trayhurn

American Journal of Physiology - Endocrinology and MetabolismPublished 1 April 2005Vol. 288no. E731-E740DOI: 10.1152/ajpendo.00475.2004

Electrophysiological Properties of Pluripotent Human and Mouse Embryonic Stem Cells

Kai Wang, Tian Xue, Suk-Ying Tsang, Rika Van Huizen, Chun Wai Wong, Kevin W. Lai, Zhaohui Ye, Linzhao Cheng, Ka Wing Au, Janet Zhang, Gui-Rong Li, Chu-Pak Lau, Hung-Fat Tse M.D., Ronald A. Li Ph.D.

Volume 23, Issue 10, pages 1526–1534, November 2005

Primaclade—a flexible tool to find conserved PCR primers across multiple species

Michael D. Gadberry, Simon T. Malcomber, Andrew N. Doust and Elizabeth A. Kellogg.

Bioinformatics (2005) 21 (7): 1263-1264.
doi: 10.1093/bioinformatics/bti134

A Functional Common Polymorphism in a Sp1 Recognition Site of the Epidermal Growth Factor Receptor Gene Promoter

Wanqing Liu, Federico Innocenti, Michael H. Wu, Apurva A. Desai, M. Eileen Dolan, Edwin H. Cook Jr., and Mark J. Ratain.

Cancer Res January 1, 2005 65; 46

Neutrophil Depletion Inhibits Experimental Abdominal Aortic Aneurysm Formation

Jonathan L. Eliason, MD; Kevin K. Hannawa, BS; Gorav Ailawadi, MD; Indranil Sinha, BA; John W. Ford, BA; Michael P. Deogracias, BS; Karen J. Roelofs, DVM; Derek T. Woodrum, MD; Terri L. Ennis, BS; Peter K. Henke, MD; James C. Stanley, MD; Robert W. Thompson, MD; Gilbert R. Upchurch Jr, MD

2005; 112: 232-240
doi: 10.1161/​CIRCULATIONAHA.104.517391

Microarrays for the Detection of HBV and HDV

Sun Zhaohui, Zheng Wenling, Zhang Bao, Shi Rong and MA Wenli.
Journal of Biochemistry and Molecular Biology, Vol. 37, No. 5, September 2004, pp. 546-551[37-5]0410071919_546-551-.pdf

White spot syndrome virus (WSSV) detected by PCR in rotifers and rotifer resting eggs from shrimp pond sediments

Dong-Chun Yan, Shuang-Lin Dong, Jie Huang, Xiao-Ming Yu, Min-Yi Feng, Xiang-Yi Liu.
DISEASES OF AQUATIC ORGANISMS; Vol. 59: 69–73, 2004; Published April 21

Antigen Genes for Molecular Epidemiology of Leishmaniasis: Polymorphism of Cysteine Proteinase B and Surface Metalloprotease Glycoprotein 63 in the Leishmania donovani Complex

Kelly Wilber Quispe Tintaya, Xu Ying, Jean-Pierre Dedet, Suman Rijal, Xavier De Bolle and Jean-Claude Dujardin.
J Infect Dis. (2004) 189 (6): 1035-1043.
doi: 10.1086/382049

Primer design using genetic algorithm

Jain-Shing Wu, Chungnan Lee, Chien-Chang Wu and Yow-Ling Shiue.
Bioinformatics (2004) 20 (11): 1710-1717.
doi: 10.1093/bioinformatics/bth147

Detection and Enumeration of Aromatic Oxygenase Genes by Multiplex and Real-Time PCR. Brett R. Baldwin, Cindy H. Nakatsu, Loring Nies
Archvillin, a muscle-specific isoform of supervillin, is an early expressed component of the costameric membrane skeleton Sang W. Oh*, Robert K. Pope, Kelly P. Smith, Jessica L. Crowley, Thomas Nebl, Jeanne B. Lawrence, Elizabeth J. Luna 2003
Bioinformatics tools and guideline for PCR primer design Marianna Szemesa, D. Schoenb.
Quantitative Trait Loci that controls Vector Competence for Dengue-2 Virus in the Mosquito Aedes aegypti Christopher F. Bosioa, Ruth E. Fultona, Mike L. Salaseka, Barry J. Beatya,
William C. Black.
Evaluation of scar markers for shatter resistance in brassicas Orarat Mongkolporn Eddie CK Pang, Gururaj P Kadkol, Paul WJ Taylor
Expression of cytochrome P450 2A3 in rat esophagus: relevance to N- nitrosobenzylmethylamine Rajaram Gopalakrishnan, Mark A. Morse, Jerry Lu, Christopher M. Weghorst,
Carol L.K. Sabourin, Gary D. Stonerand Sharon E. Murphy
Effect of C-C Chemokine Receptor 2 (CCR2) Knockout on Type-2 (Schistosomal Antigen- Elicited) Pulmonary Granuloma Formation Analysis of Cellular Recruitment and Cytokine Responses Kelly S. Warmington, Landin Boring, Jeffrey H. Ruth, Joanne Sonstein, Cory M.
Hogaboam, Jeffrey L. Curtis, Steven L. Kunkel, Israel R.Charol, Stephen W.
Expression and Participation of Eotaxin During Mycobacterial (Type 1) and Schistosomal (Type 2) Antigen-Elicited Granuloma Formation Jeffrey H. Ruth, Nicholas W. Lukacs, Kelly S. Warmington, Tim J. Polak, Marie
Burdick, Steven L. Kunkel, Robert M. Strieter, Stephen W. Chensue.
REBASE-restriction enzymes and methylases
Richard J. Roberts, Dana Macelis.
A New Function for the LDL Receptor: Transcytosis of LDL across the Blood-Brain Barrier Bénédicte Dehouck, Laurence Fenart, Marie-Pierre Dehouck, Annick Pierce,
Gérard Torpier, Roméo Cecchelli.
RecActiveT Gene enrichment using RecA (version A) Laurence Fenart, Marie Burdick.
Primer Premier 4, Biotechnology Software and Internet Journal, May-June 1997, page 31 Article Summary
Primer Premier: A program for design of degenerate primers from a protein sequence", Biotechniques, February 1998 (in press). Vinay Singh, Sita Naik Article Summary
Glycosylation Motifs That Direct Arabinogalactan Addition to Arabinogalactan- Proteins Li Tan, Joseph F. Leykam, Marcia J. Kieliszewski, June 2003
Degenerate primer study by its extraction from protein sequences. Vinay Singh, Sita Naik Primer Premier: A Program for Design of
Degenerate Primers from a Protein Sequence
Placental Restriction Increases the Expression of Prostaglandin Endoperoxide G/H Synthase-2 and EP2 mRNA in the Fetal Sheep Kidney during Late Gestation Sarah J. Williams, Caroline McMmillen, Dean B. Zaragozaand David M. Olson
Piroxicam Is an Ineffective Inhibitor of N-Nitrosomethylbenzylamine-induced
Tumorigenesis in the Rat sophagus
Peter S. Carlton, Rajaram Gopalakrishnan, Ashok Gupta, Beth W. Liston, Suzy
Habib, Mark A. Morse, Gary D. Stoner
Isolation and Characterization of a Species- Specific DNA Fragment for Identification of Candida (Torulopsis) glabrata by PCR Karsten Becker, Dorte Badehorn, Birgit Keller, Martina Schulte, Karl Heinz Böhm,
Georg Peters, Wolfgang Fegeler
Nachweis gentechnischer Veränderungen in Mais mittels PCR  B. Ehlers, E. Strauch, M. Goltz, D. Kubsch, H. Wagner, H. Maidhof, J. Bendiek, B.
Appel, H. J. Buhk.
Quantitative Real-Time PCR Detection of Rift Valley Fever Virus and Its Application to Evaluation of Antiviral Compounds. Stephan Garcia, Jean Marc Crance, Agnes Billecocq, Andre Peinnequin, Alain
Jouan, Michele Bouloy, Daniel Garin.
Expression of Novel ING Variants Is Regulated by Thyroid Hormone in the Xenopus laevis Tadpole Mary J. Wagner, Markéta Gogela-Spehar§, Rachel C. Skirrow, Randal N. Johnston,
Karl Riabowol, Caren C. Helbing
Detection of Exogenous Genes in genetically modified plants with multiplex Polymerase Chain Reaction Zhen Tao, Xing-Feng Cai, Sheng-Li Yang, Yi Gong
Quantification of transforming growth factor ß1 (TGFß1) mRNA expression in mouse preimplantation embryos and determination of TGFß receptor (type I and type II) expression in mouse embryos and reproductive tract Judy F.C. Chow, Kai-Fai Lee, Samuel T.H. Chan, William S.B. Yeung
SSCP Analysis of cDNA Markers Provides a Dense Linkage Map of the Aedes aegypti Genome Ruth E. Fultona, Michael L. Salaseka, Nancy M. DuTeaua, William C. Black.
Molecular Interactions between the Specialist Herbivore Manduca sexta (Lepidoptera, Sphingidae) and Its Natural Host Nicotiana attenuata. IV. Insect-Induced Ethylene Reduces Jasmonate-Induced Nicotine Accumulation by Regulating Putrescine N- Methyltransferase Transcripts1,2
Robert A. Winz, Ian T. Baldwin
Expression of an Antimicrobial Peptide via the Chloroplast Genome to Control Phytopathogenic Bacteria and Fungi
Gerald DeGray, Kanniah Rajasekaran, Franzine Smith, John Sanford, Henry


Author and Details

Accurate Identification of Deamidated Peptides in Global Proteomics Using a Quadrupole Orbitrap Mass Spectrometer.

Nepomuceno AI, Gibson RJ, Randall SM, Muddiman DC; PMID: 24289162 J Proteome Res. 2013 Dec 12.


Reversal of chemosensitivity and induction of cell malignancy of a non-malignant prostate cancer cell line upon extracellular vesicle exposure

Panagopoulos K, Cross-Knorr S, Dillard C, Pantazatos D, Del Tatto M, Mills D, Goldstein L, Renzulli J, Quesenberry P, Chatterjee D.
Mol Cancer. 2013; 12: 118 Published online 2013 October 8. doi: 10.1186/1476-4598-12-118


Insights into pediatric diffuse intrinsic pontine glioma through proteomic analysis of cerebrospinal fluid

Saratsis AM, Yadavilli S, Magge S, Rood BR, Perez J, Hill DA, Hwang E, Kilburn L, Packer RJ, Nazarian J.
Neuro Oncol. 2012 May; 14(5): 547–560; Published online 2012 April 5. doi: 10.1093/neuonc/nos067


Less label, more free: Approaches in label-free quantitative mass spectrometry

Karlie A. Neilson, Naveid A. Ali, Sridevi Muralidharan, Mehdi Mirzaei, Michael Mariani, Garine Assadourian, Albert Lee, Steven C. van Sluyter, Paul A. Haynes.
Proteomics, 11, 535-553


Differential proteomics of plant development.

Tomas Takac, Tibor Pechan, Jozef Samaj.
Genetic Engineering & Biotechnology News. 2012 May 15; 32 (No. 10)
Journal of Proteomics, 74, 577-588 (2011).


Identification of contractile vacuole proteins in Trypanosoma cruzi.

Paul N. Ulrich, Veronica Jimenez, Miyoung Park, Vicente P. Martins, James Atwood III, Kristen Moles, Dalis Collins, Peter Rohloff, Rick Tarleton, Sivia N.J. Moreno, Ron Orlando, Roberto Docampo.
Plos One, 6(6), e18013 (2011).


Stable isotope labeling by amino acids in cell culture (SILAC) - an introduction for biologist.

Robert Graham, Michael Sweredoski, Sonja Hess.
Current Proteomics, 8, 2-16 (2011)


Protein profile of exosomes from trabecular meshwork cells.

W. D. Stamer, E. A. Hoffman, J. M. Luther, D. L. Hachey, K. L. Schey.
Journal of Proteomics, 74, 796-804 (2011)


Increasing proteome coverage with offline RP HPLC coupled to online RP nanoLC-MS.

Emine Gokce, Genna L. Andrews, Ralph A. Dean, David C. Muddiman.
Journal of Chromatography B, 879, 610-614 (2011)


Differential epithelial and stromal protein profiles in keratoconus and normal corneas.

Joseph R, Srivastava O. P, Pfister R. R.
Experimental Eye Research, 92, 282-298 (2011)


Improving proteome coverage on a LTQ-Orbitrap using design of experiments.

Genna L. Andrews, Ralph A. Dean, Adam M. Hawkridge, David C. Muddiman.
Journal of the American Society for Mass Spectrometry, 4, 773-783 (2011)


Direct comparison of stable isotope labeling by amino acids in cell culture and spectral counting for quantitative proteomics.

Timothy S. Collier, Prasenjit Sarkar, William L. Franck, Balaji M. Rao, Ralph A. Dean, David C. Muddiman.
Analytical Chemistry, 82, 8696-8702 (2010)



Author and Details

LC-MS/MS biopharmaceutical glycoanalysis: identification of desirable reference material characteristics

Schiel JE, Au J, He HJ, Phinney KW
Anal Bioanal Chem. 2012 Jun;403(8):2279-89.Epub 2012 Feb 22.


Accelerating Glycan Characterization: New Workflow Brings Together Multistage Mass Spec and Data Processing to Speed Analysis

Saba J
Genetic Engineering & Biotechnology News. 2012 May 15; 32 (No. 10)


Analysis of folate binding protein N-linked glycans by mass spectrometry

Jaiswal N, Saraswat S, Ratnam M, Isailovic D.
J Proteome Res. 2012 Mar 2;11(3):1551-60.


Analysis of Francisella Tularensis Glycoproteins

Balonova L, Hernychova L.
BSL3 and BSL4 Agents: Proteomics, Glycomics and Antigenicity (eds J. Stulik, R. Toman, P. Butaye and R. G. Ulrich). September 2011: 67-76.


One-year plasma N-linked glycome intra-individual and inter-individual variability in the chicken model of spontaneous ovarian adenocarcinoma

Dixon RB, Bereman MS, Petitte JN, Hawkridge AM, Muddiman DC.
Int J Mass Spectrom. 2011 Aug 15;305(2-3): 79-86.


Determination of Glycan Structure from Tandem Mass Spectra

Bocker S, Kehr B, Rasche F.
IEEE/ACM Trans Comput Biol Bioinform. 2011 Jul-Aug;8(4): 976-86.


Differential characterization and classification of tissue specific glycosaminoglycans by tandem mass spectrometry and statistical methods

Leymarie N, McComb ME, Naimy H, Staples GO, Zaia J.
Int J Mass Spectrom. 2011.


Challenges to Developing Proteomic-Based Breast Cancer Diagnostics

Drake RR, Cazares LH, Jones EE, Fuller TW, Semmes OJ, Laronga C.
OMICS. 2011 May;15(5): 251-9. Epub 2011 Feb 19.


N-Linked Global Glycan Profiling by NanoLC Mass Spectrometry

Toms SA, Wei RJ.
Nanoproteomics, Methods in Molecular Biology. 2011;790(2): 87-97.


The Use and Abuse of -Omes

Prohaska SJ, Stadler PF.
Bioinformatics for Omics Data, Methods in Molecular Biology. 2011;719(1): 173-196.


Automated Glycan Structural Isomer Differentiation Using SimGlycan Software

Saba J, Apte A, Meitei NS, Viner R.


Rapid comparison of a candidate biosimilar to an innovator monoclonal antibody with advanced liquid chromatography and mass spectrometry technologies

Xie H, Chakraborty A, Ahn J, Yu YQ, Dakshinamoorthy DP, Gilar M, Chen W, Skilton SJ, Mazzeo JR.
MAbs. 2010 Jul-Aug;2(4): 379-394.


The effects of abundant plasma protein depletion on global glycan profiling using NanoLC FT-ICR mass spectrometry

Bereman MS, Muddiman DC.
Anal Bioanal Chem. 2010 Feb;396(4): 1473-9. Epub 2010 Jan 20.


Structural Characterization of Prostatic Glycopeptides Using Triple Quadrupole Mass Spectrometry Approaches Coupled with SimGlycan Analysis Software

Nyalwidhe J, Apte A, Meitei NS, Semmes OJ, Kumar S, Drake R.


Bioinformatics in Glycomics: Glycan Characterization with Mass Spectrometric Data Using SimGlycan™

Apte A, Meitei NS.
Functional Glycomics Methods in Molecular Biology, Humana Press. 2010,600: 269-281.


SimGlycan™ Software*: A New Predictive Carbohydrate Analysis Tool for MS/MS Data Automated Data Interpretation for Glycan Characterization

Albanese J, Glueckmann M, Lenz C.


A Unique Workflow for Glycoprotein Charecterization- From Sample Preparation to MS/MS Interpretation Using AB Sciex TOF/TOF 5800 System

Albanese J.


The pseudo-gradient algorithm for residual gas analysis

Beli I.
Materials and technology. 2009;43 (1): 11-21.


Glycomic Characterization of Prostate-Specific Antigen and Prostatic Acid Phosphatase in Prostate Cancer and Benign Disease Seminal Plasma Fluids

White KY, Rodemich L, Nyalwidhe JO, Comunale MA, Clements MA, Lance RS, Schellhammer PF, Mehta AS, Semmes OJ, Drake RR.
J Proteome Res. 2009 Feb;8(2): 620-30.


Development of a nanoLC LTQ Orbitrap Mass Spectrometric Method for Profiling Glycans Derived from Plasma from Healthy, Benign Tumor Control and Epithelial Ovarian Cancer Patients

Bereman MS, Williams TI, Muddiman DC.
Anal Chem. 2009 Feb 1;81(3): 1130-6.


Glycobiology: A spoonful of sugar

Blow N.
Nature. 2009 Jan 29;457(7229): 617-20.



Author and Details

Comparative Phospholipid Profiles of Control and Glaucomatous Human Trabecular Meshwork.

Aribindi K., Guerra Y., Lee, R. K., & Bhattacharya S. K. IOVS IOVS-12-10517.


Quantitative metabolomic and lipidomic profiling reveals aberrant amino acid metabolism in type 2 diabetes.

Kaur P, Rizk N, Ibrahim S, Luo Y, Younes N, Perry B, Dennis K, Zirie M, Luta G, Cheema AK. Mol Biosyst. 2013 Feb 2;9(2):307-17.


Metabolomic changes in gastrointestinal tissues after whole body radiation in a murine model.

Ghosh SP, Singh R, Chakraborty K, Kulkarni K, Uppal A, Luo Y, Kaur P, Pathak R, Sree Kumar K, Jensenc MH and Cheema AK . Mol. BioSyst., 2013,9, 723-731.


Recent Advances in Shotgun Lipidomics and their Implication for Vision Research and Ophthalmology.

Bhattacharya SK. Curr Eye Res. 2013 Apr;38(4):417-27.


Application of ‘omics technologies to biomarker discovery in inflammatory lung diseases.

Wheelock CE, Goss VM, Balgoma D, Nicholas B, Brandsma J, Skipp PJ, Snowden S, D'Amico A, Horvath I, Chaiboonchoe A, Ahmed H, Ballereau S, Rossios C, Chung KF, Montuschi P, Fowler SJ, Adcock IM, Postle AD, Dahlén SE, Rowe A, Sterk PJ, Auffray C, Djukanovic R. Eur Respir J. 2013 Feb 8.


A multimodal mass spectrometry imaging approach for the study of musculoskeletal tissues.

Chughtaia S, Chughtaia K, , Pastora BC, , Kissa A, Agrawal P, MacAleesea L, Heeren R. International Journal of Mass Spectrometry. 2012.


Lipid profiling of serum samples from calcific coronary artery disease patients using UPLC/TOF-HDMSE and multivariate data analysis.

Isaac G


Automated Lipid Identification Using UPLC/HDMSE in Combination with SimLipid.

Isaac G, McDonald S, Astarita G


Composition and Localization of Lipids in Penaeus merguiensis Ovaries during the Ovarian Maturation Cycle as Revealed by Imaging Mass Spectrometry.

Chansela P, Goto-Inoue N, Zaima N, Hayasaka T, Sroyraya M, Kornthong N, Engsusophon A, Tamtin M, Chaisri C, Sobhon P, Setou M.
PLoS One. 2012.


A rapid and quantitative LC-MS/MS method to profile sphingolipids.

Scherer M, Jaschinski KL, Ecker J, Schmitz G, and Liebisch G. J Lipid Res.; 51(7): 2010



Author and Details

Reliable and Rapid Identification of Listeria monocytogenes and Listeria Species by Artificial Neural Network-Based Fourier Transform Infrared Spectroscopy

Rebuffo CA, Schmitt J, Wenning M, von Stetten F, Scherer S.
Appl Environ Microbiol. 2006 Feb; 72(2): 994-1000.
PMCID: 1392910


The inflammatory and normal transcriptome of mouse bladder detrusor and mucosa

Saban MR, Hellmich HL, Turner M, Nguyen NB, Vadigepalli R, Dyer DW, Hurst RE, Centola M, Saban R BMC Physiol. 2006; 6: 1. PMCID: 1382248


Development and validation of a bovine macrophage specific cDNA microarray

Jensen K, Talbot R, Paxton E, Waddington D, Glass EJ.
BMC Genomics. 2006; 7: 224.
PMCID: 1590031


Molecular characterisation of the caprine (Capra hircus) lymphocyte function-associated antigen-1 alpha subunit-encoding cDNA

Fett T, Zecchinon LL, Baise EA, Desmecht DJ.
BMC Vet Res. 2005; 1: 4.
PMCID: 1266385


Transcription and Histone Modifications in the Recombination-Free Region Spanning a Rice Centromere

Yan H, Jin W, Nagaki K, Tian S, Ouyang S, Buell CR, Talbert PB, Henikoff S, Jiang J.
Plant Cell. 2005 Dec; 17(12): 3227-3238.
PMCID: 1315366


Selection of reference genes for gene expression studies in human neutrophils by real-time PCR

Zhang X, Ding L, Sandford AJ.
BMC Mol Biol. 2005; 6: 4.
PMCID: 551605


The CD11a partner in Sus scrofa lymphocyte function-associated antigen-1 (LFA-1): mRNA cloning, structure analysis and comparison with mammalian homologues

Vanden Bergh PG, Fett T, Zecchinon LL, Thomas AV, Desmecht DJ.
BMC Vet Res. 2005; 1: 5.
PMCID: 1276801


Development of ESTs from chickpea roots and their use in diversity analysis of the Cicer genus

Buhariwalla HK, B J, Eshwar K, Crouch JH.
BMC Plant Biol. 2005; 5: 16. PMCID: 1215491


Detection of the Bacillus anthracis gyrA Gene by Using a Minor Groove Binder Probe

Hurtle W, Bode E, Kulesh DA, Kaplan RS, Garrison J, Bridge D, House M, Frye MS, Loveless B, Norwood D
J Clin Microbiol. 2004 Jan; 42(1): 179-185.
PMCID: 321681


Real-Time PCR Assay for a Unique Chromosomal Sequence of Bacillus anthracis

Bode E, Hurtle W, Norwood D.
J Clin Microbiol. 2004 Dec; 42(12): 5825-5831.
PMCID: 535252


Cloning of 16S rRNA genes amplified from normal and disturbed vaginal microflora suggests a strong association between Atopobium vaginae, Gardnerella vaginalis and bacterial vaginosis

Verhelst R, Verstraelen H, Claeys G, Verschraegen G, Delanghe J, Van Simaey L,
De Ganck C, Temmerman M, Vaneechoutte M
BMC Microbiol. 2004; 4: 16.
PMCID: 419343


Molecular Detection and Genotyping of Male-Specific Coliphages by Reverse Transcription-PCR and Reverse Line Blot Hybridization

Vinjé J, Oudejans SJ, Stewart JR, Sobsey MD, Long SC
Appl Environ Microbiol. 2004 Oct; 70(10): 5996-6004.
PMCID: 522105


High-throughput mutation detection underlying adaptive evolution of Escherichia coli-K12

Honisch C, Raghunathan A, Cantor CR, Palsson BØ, van den Boom D.
Genome Res. 2004 Dec; 14(12): 2495-2502.
PMCID: 534674


Real-Time PCR Quantitation of Clostridia in Feces of Autistic Children

Song Y, Liu C, Finegold SM
Appl Environ Microbiol. 2004 Nov; 70(11): 6459-6465. PMCID: 525120


Quantitative evaluation by minisequencing and microarrays reveals accurate multiplexed SNP genotyping of whole genome amplified DNA

Lovmar L, Fredriksson M, Liljedahl U, Sigurdsson S, Syvänen AC
Nucleic Acids Res. 2003 Nov 1; 31(21): e129.
PMCID: 275486


Bioinformatics tools and guideline for PCR primer design

Marianna Szemesa, D. Schoenb.


Sequence tagged microsatellite profiling (STMP): improved isolation of DNA sequence flanking target SSRs

M. J. Hayden, G. Good, P. J. Sharp


Analysis of the ultraviolet B response in primary human keratinocytes using oligonucleotide microarrays

Sesto A, Navarro M, Burslem F, Jorcano JL.
Proc Natl Acad Sci U S A. 2002 Mar 5; 99(5): 2965-2970
PMCID: 122456


Targeted development of informative microsatellite (SSR) markers

M. J. Hayden1, P. J. Sharp


Development and Evaluation of Serotype- and Group- Specific Fluorogenic Reverse Transcriptase PCR (TaqMan) Assays for Dengue Virus

Johnny D. Callahan, Shuenn-Jue L. Wu, Amanda Dion-Schultz, Beverly E. Mangold,
Leonard F. Peruski, Douglas M. Watts, Kevin R. Porter, Gerald R. Murphy, Wuryadi
Suharyono, Chwan-Chuen King, Curtis G. Hayes, Joseph J. Temenak.


Sequence of the Genome of Salmonella Bacteriophage P22.

Carolyn Vander, Andrew M. Kropinsk

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