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Citations and Reviews

Vilen, Z., Joeh, E., Critcher, M., Parker, C.G. and Huang, M.L., 2021. Proximity Tagging Identifies the Glycan-Mediated Glycoprotein Interactors of Galectin-1 in Muscle Stem Cells. ACS Chemical Biology, 16(10), pp.1994-2003.
 
Paton, B., Suarez, M., Herrero, P. and Canela, N., 2021. Glycosylation Biomarkers Associated with Age-Related Diseases and Current Methods for Glycan Analysis. International Journal of Molecular Sciences, 22(11), p.5788.
 
Remoroza, C.A., Mak, T.D., De Leoz, M.L.A., Mirokhin, Y.A. and Stein, S.E., 2018. Creating a mass spectral reference library for oligosaccharides in human milk. Analytical chemistry, 90(15), pp.8977-8988.
 
Robinson, R.C., Poulsen, N.A. and Barile, D., 2018. Multiplexed bovine milk oligosaccharide analysis with aminoxy tandem mass tags. PloS one, 13(4), p.e0196513.
 
Szabo, Z., Thayer, J.R., Reusch, D., Agroskin, Y., Viner, R., Rohrer, J., Patil, S.P., Krawitzky, M., Huhmer, A., Avdalovic, N. and Khan, S.H., 2018. High Performance Anion Exchange and Hydrophilic Interaction Liquid Chromatography Approaches for Comprehensive Mass Spectrometry-Based Characterization of the N-Glycome of a Recombinant Human Erythropoietin. Journal of proteome research. 2018 Feb 23. doi: 10.1021/acs.jproteome.7b00862
 
Chen, B., Zhong, X., Feng, Y., Snovida, S., Xu, M., Rogers, J. and Li, L., 2017. Targeted MultiNotch MS3 Approach for Relative Quantification of N-Glycans Using Multiplexed Carbonyl-Reactive Isobaric Tags. Analytical chemistry, 90(2), pp.1129-1135.
 
Szabo, Z., Thayer, J. R., Agroskin, Y., Lin, S., Liu, Y., Srinivasan, K., Saba, J., Viner, R., Huhmer, A., Rohrer, J. and Reusch, D. (2017). In-depth analyses of native N-linked glycans facilitated by high-performance anion exchange chromatography-pulsed amperometric detection coupled to mass spectrometry. Analytical and Bioanalytical Chemistry, pp.1-13.
 
Wang, Z., Lorin, C., Koutsoukos, M., Franco, D., Bayat, B., Zhang, Y., Carfi, A., Barnett, S.W. and Porter, F. (2016). Comprehensive Characterization of Reference Standard Lots of HIV-1 Subtype C Gp120 Proteins for Clinical Trials in Southern African Regions. Vaccines, 4(2), p.17.
 
Meitei, N. S., Apte, A., Snovida, S.I., Rogers, J.C., Saba, J. (2015). Automating Mass Spectrometry-Based Quantitative Glycomics using Aminoxy Tandem Mass Tag Reagents with SimGlycan. Journal of Proteomics. doi:10.1016/j.jprot.2015.05.015
 
Yang JM, Ai J, Bao Y, Yuan Z, Qin Y, Xie YW, Tao D, Fu D, Peng 2. (2014). Investigation of the correlation between charge and glycosylation of IgG1 variants by liquid chromatography–mass spectrometry. Anal Biochem PMID: 24287081
 
Udayananth Aich , Deanna C. Hurum, Lipika Basumallick , Srinivasa Rao, Chris Pohl, Jeffrey S. Rohrer, Sebastian Kandzia (2014). Evaluation of desialylation during 2-amino benzamide labeling of asparagine-linked oligosaccharides. PMID: 24657360
 
Mindy Porterfield, Peng Zhao, Haiyong Han, John Cunningham, Kazuhiro Aoki, Daniel D. Von Hoff, Michael J. Demeure, J. Michael Pierce, Michael Tiemeyer and Lance Wells (2014). Discrimination between Adenocarcinoma and Normal Pancreatic Ductal Fluid by Proteomic and Glycomic Analysis. Proteome Res., 2014, 13 (2), pp 395–407 DOI: 10.1021/pr400422g
 
Tsai, Y.M., Hsu, S.C., Zhang, J., Zhou, Y.F., Plunkett, B., Huang, S.K., & Gao, P.S. (2013). Functional interaction of cockroach allergens and mannose receptor (CD206) in human circulating fibrocytes. PLoS ONE, 8(5).
 
Strum, J.S., Nwosu, C.C., Hua, S., Kronewitter, S.R., Seipert, R.R., Bachelor, R.J., An, H.J., & Lebrilla, C.B. (2013). Automated assignments of N- and O-site specific glycosylation with extensive glycan heterogeneity of glycoprotein mixtures. Anal Chem., 85(12), 5666-5675.
 
Woodin, C.L., Maxon, M., & Desaire, H. (2013) Software for automated interpretation of mass spectrometry data from glycans and glycopeptides. Analyst, 138(10), 2793-2803
 
Schiel, J.E., Au, J., He, H.J., & Phinney, K.W. (2012). LC-MS/MS biopharmaceutical glycoanalysis: identification of desirable reference material characteristics. Anal Bioanal Chem., 403(8), 2279-2289.
 
Saba, J. (2012). Accelerating Glycan Characterization: New Workflow Brings Together Multistage Mass Spec and Data Processing to Speed Analysis. Genetic Engineering & Biotechnology News, 32(10).
 
Jaiswal, N., Saraswat, S., Ratnam, M., & Isailovic, D. (2012). Analysis of folate binding protein N-linked glycans by mass spectrometry. J Proteome Res., 11(3), 1551-1560.
 
Balonova, L., Hernychova, L., Stulik, J., Toman, R., Butaye, P., & Ulrich, R.G. (2011). Analysis of Francisella Tularensis Glycoproteins, in BSL3 and BSL4 Agents: Proteomics, Glycomics and Antigenicity. Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, Germany. doi: 10.1002/9783527638192.ch6
 
Dixon, R.B., Bereman, M.S., Petitte, J.N., Hawkridge, A.M., & Muddiman, D.C. (2011). One-Year Plasma N-linked Glycome Intra-individual and Inter-individual Variability in the Chicken Model of Spontaneous Ovarian Adenocarcinoma. Int J Mass Spectrom., 305(2-3), 79-86.
 
Böcker, S., Kehr, B., & Rasche, F.(2011). Determination of glycan structure from tandem mass spectra. IEEE/ACM Trans Comput Biol Bioinform., 8(4), 976-986.
 
Leymarie, N., McComb, M.E., Naimy, H., Staples, G.O., & Zaia, J. (2012). Differential Characterization and Classification of Tissue Specific Glycosaminoglycans by Tandem Mass Spectrometry and Statistical Methods. Int J Mass Spectrom, 312, 144-154.
 
Drake, R.R., Cazares, L.H., Jones, E.E., Fuller, T.W., Semmes, O.J., & Laronga, C. (2011). Challenges to developing proteomic-based breast cancer diagnostics. OMICS, 15(5), 251-259.
 
Bereman, M.S., & Muddiman, D.C.(2011). N-linked global glycan profiling by nanoLC mass spectrometry. Methods Mol Biol, 790, 87-97.
 
Prohaska, S.J., & Stadler, P.F. (2011) The use and abuse of -omes. Methods Mol Biol., 719, 173-196.
 
Apte, A., & Meitei, N. S. (2010). Bioinformatics in glycomics: Glycan characterization with mass spectrometric data using SimGlycan™. In Functional Glycomics (pp. 269-281). Humana Press.
 
Xie, H., Chakraborty, A., Ahn, J., Yu, Y.Q., Dakshinamoorthy, D.P., Gilar, M., Chen, W., Skilton, S.J., & Mazzeo, J.R.(2010). Rapid comparison of a candidate biosimilar to an innovator monoclonal antibody with advanced liquid chromatography and mass spectrometry technologies. MAbs., 2(4).
 
White, K.Y., Rodemich, L., Nyalwidhe, J.O., Comunale, M.A., Clements, M.A., Lance, R.S., Schellhammer, P.F., Mehta, A.S., Semmes, O.J., & Drake, R.R. (2009) Glycomic characterization of prostate-specific antigen and prostatic acid phosphatase in prostate cancer and benign disease seminal plasma fluids.J Proteome Res., 8(2), 620-630.
 
Bereman, M.S., Williams, T.I., & Muddiman, D.C.(2009). Development of a nanoLC LTQ orbitrap mass spectrometric method for profiling glycans derived from plasma from healthy, benign tumor control, and epithelial ovarian cancer patients. Anal Chem., 81(3), 1130-1136.
 
Blow, N. (2009). Glycobiology: A spoonful of sugar. Nature,457(7229), 617-620.


Resources

Literature

MultiNotch MS3 Approach for Relative Quantification of N-Glycans Using Multiplexed Carbonyl-Reactive Isobaric Tags...

Creating a Mass Spectral Reference Library for Oligosaccharides in Human Milk...

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Posters

Automated and Rapid Characterization of Low-Molecular-Weight Heparin Oligosaccharides Using TripleTOF 5600 Mass Spectrometer...

SimGlycan: Informatics Support for Automated Characterization of Low-Molecular-Weight...

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Application Notes

A Unique Workflow for Glycoprotein Characterization from Sample Preparation to MS/MS Spectral...

SimGlycan Software: A New Predictive Carbohydrate Analysis Tool for MS/MS Data Automated Data Interpretation for Glycan Characterization...

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Automating mass spectrometry based glycan identification and quantitation using SimGlycan software

Use SimGlycan for glycan and glycopeptide analysis, glycan structure prediction, glycosylation analysis...

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