Products >> Upgrades >> ProteoIQ



ProteoIQ® 2.80 Released

The new version includes the following enhancements:

  • Support for mzML file format

  • Generate comprehensive reports
    ProteoIQ® can now generate comprehensive peptide and protein specific reports.

ProteoIQ® 2.70 Released

The new version includes the following enhancements:

  • Support for SQT and MSF file formats
    ProteoIQ® now supports Sequest SQT and Proteome Discoverer v1.4 MSF file formats.

  • Support for modifications present in ProteinPilot
    ProteoIQ® now supports all the modifications which are supported by the ProteinPilot database search engine.

A Comprehensive Qualitative and Quantitative Suite for Proteomics

ProteoIQ® is a comprehensive suite to validate and quantify proteins by combining results from popular mass spectrometry platforms and database search engines. With dynamic extracted ion chromatogram plots, the ability to view every MS spectra at any time point and the ability to manually select a peak area, ProteoIQ® provides the ultimate level of control.

ProteoIQ® provides a completely customizable interface to support any form of biological annotation. You can easily compare protein quantitative results in relation to biological pathways, protein localization, protein function, or even compare to transcript abundance. Every protein identification in ProteoIQ® can be linked to any external or internal knowledge database. Custom links are provided to GenBank, UniProt, IPI, and SwissProt databases or even an in-house LIMS.


  • Statistical Validation
  • Label Free Quantification
  • Spectral Counting
  • Precursor Intensity (TIC)
  • Precursor Intensity (AUC)
  • Isobaric Tag Quantitation
  • Isotopic Labeling Quantitation
  • Biological Annotation


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